Extract coefficients from a lineage frequency model — coef.lfq_fit • lineagefreq

Extract coefficients from a lineage frequency model

Usage

# S3 method for class 'lfq_fit'
coef(object, type = c("growth_rate", "all"), ...)

Arguments

object: An lfq_fit object.
type: What to return: "growth_rate" (default) for growth rates only, or "all" for intercepts and growth rates.
...: Ignored.

Value

Named numeric vector.

Examples

sim <- simulate_dynamics(n_lineages = 3,
  advantages = c("A" = 1.2, "B" = 0.8), seed = 1)
fit <- fit_model(sim)
coef(fit)
#>          A          B        ref 
#>  0.1793367 -0.2340138  0.0000000